STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104918495Nascent polypeptide-associated complex subunit beta. (158 aa)    
Predicted Functional Partners:
naca
Nascent polypeptide-associated complex subunit alpha isoform X4.
   
 
 0.924
rpl31
Large subunit ribosomal protein L31e.
   
 
 0.917
LOC104940313
Uncharacterized protein LOC104940313 isoform X1.
   
 
 0.892
rpl23a
Large subunit ribosomal protein L23Ae.
   
 
 0.882
rpl6
Large subunit ribosomal protein L6e.
   
 
 0.841
rpl21
Large subunit ribosomal protein L21e.
   
   0.836
rpl32
Large subunit ribosomal protein L32e.
   
   0.824
rpl14
Large subunit ribosomal protein L14e.
   
 
 0.822
rpl29
Large subunit ribosomal protein L29e.
   
   0.816
rpl30
Large subunit ribosomal protein L30e.
   
   0.813
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.