STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qars1Glutaminyl-tRNA synthetase. (776 aa)    
Predicted Functional Partners:
fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.999
mars1
Methionine--tRNA ligase, cytoplasmic isoform X1.
  
 0.999
eprs1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
0.999
rars1
arginyl-tRNA synthetase 1.
  
 0.997
gatb
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial isoform X5.
  
 0.992
iars1
Isoleucine--tRNA ligase, cytoplasmic.
  
 0.983
qrsl1
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
  
 0.982
rpl30
Large subunit ribosomal protein L30e.
   
 0.978
rpl23a
Large subunit ribosomal protein L23Ae.
   
 0.977
rpl29
Large subunit ribosomal protein L29e.
   
 0.975
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.