STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aplp1Amyloid-like protein 1 isoform X1. (713 aa)    
Predicted Functional Partners:
sorl1
Sortilin-related receptor isoform X1.
    
 0.749
NCSTN
Nicastrin.
    
 0.678
ENSLCRP00005029456
annotation not available
   
 0.641
tnfrsf21
Tumor necrosis factor receptor superfamily member 21.
    
 
 0.597
fkrp
Fukutin-related protein.
      
 0.592
sdhaf1
Succinate dehydrogenase assembly factor 1, mitochondrial.
      
 0.575
psenen
Gamma-secretase subunit PEN-2.
    
 0.565
kalrn
Kalirin RhoGEF kinase.
   
 
  0.554
LOC104936738
Triple functional domain protein isoform X1.
   
 
  0.554
LOC104940431
Triple functional domain protein isoform X1.
   
 
  0.554
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.