STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104932368Chymotrypsin-like protease CTRL-1. (217 aa)    
Predicted Functional Partners:
ace2
Angiotensin-converting enzyme 2.
   
  
 0.697
met
Hepatocyte growth factor receptor isoform X1.
    
 0.586
LOC104920504
Macrophage-stimulating protein receptor isoform X1.
    
 0.586
mst1r
Macrophage-stimulating protein receptor.
    
 0.586
mmp9
Matrix metalloproteinase-9 (gelatinase B).
   
 0.579
LOC104938900
Trypsin.
  
0.545
LOC109140397
Polyserase-2.
  
0.545
LOC113747268
Trypsin-1.
  
0.542
LOC104928055
Trypsin-2.
  
0.542
plg
Plasminogen.
  
  
0.540
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.