STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104918598Histone chaperone asf1b-B. (197 aa)    
Predicted Functional Partners:
LOC104934778
Protein HIRA/HIR1.
    
 0.974
chaf1b
Chromatin assembly factor 1 subunit B.
   
 
 0.937
mcm2
DNA replication licensing factor MCM2.
   
 
 0.902
ENSLCRP00005004023
Ubinuclein 1.
    
 0.890
cabin1
Calcineurin-binding protein cabin-1 isoform X1.
    
 0.885
NASP
Histone-binding protein N1/N2.
   
 
 0.857
LOC104926634
Nuclear autoantigenic sperm protein.
   
 
 0.857
LOC113746904
Serine/threonine-protein kinase Chk2-like.
   
 
 0.851
chaf1a
Chromatin assembly factor 1 subunit A.
   
 
 0.830
snu13
U4/U6 small nuclear ribonucleoprotein SNU13.
   
    0.793
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.