Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC104920571 | LOC104931455 | ENSLCRP00005024052 | ENSLCRP00005010860 | Glypican 4. | Heparan sulfate 2-O-sulfotransferase HS2ST1. | 0.507 |
LOC104920571 | LOC104937829 | ENSLCRP00005024052 | ENSLCRP00005016613 | Glypican 4. | Syndecan 2. | 0.504 |
LOC104920571 | SDC3 | ENSLCRP00005024052 | ENSLCRP00005021662 | Glypican 4. | Syndecan 3. | 0.534 |
LOC104920571 | SDC4 | ENSLCRP00005024052 | ENSLCRP00005010455 | Glypican 4. | Syndecan-4 isoform X2. | 0.504 |
LOC104920571 | glce | ENSLCRP00005024052 | ENSLCRP00005019868 | Glypican 4. | Heparosan-N-sulfate-glucuronate 5-epimerase. | 0.420 |
LOC104920571 | hs2st1 | ENSLCRP00005024052 | ENSLCRP00005024280 | Glypican 4. | Heparan sulfate 2-O-sulfotransferase HS2ST1. | 0.507 |
LOC104922697 | LOC104931455 | ENSLCRP00005064127 | ENSLCRP00005010860 | Glypican-6. | Heparan sulfate 2-O-sulfotransferase HS2ST1. | 0.507 |
LOC104922697 | LOC104937829 | ENSLCRP00005064127 | ENSLCRP00005016613 | Glypican-6. | Syndecan 2. | 0.504 |
LOC104922697 | SDC3 | ENSLCRP00005064127 | ENSLCRP00005021662 | Glypican-6. | Syndecan 3. | 0.468 |
LOC104922697 | SDC4 | ENSLCRP00005064127 | ENSLCRP00005010455 | Glypican-6. | Syndecan-4 isoform X2. | 0.504 |
LOC104922697 | glce | ENSLCRP00005064127 | ENSLCRP00005019868 | Glypican-6. | Heparosan-N-sulfate-glucuronate 5-epimerase. | 0.420 |
LOC104922697 | hs2st1 | ENSLCRP00005064127 | ENSLCRP00005024280 | Glypican-6. | Heparan sulfate 2-O-sulfotransferase HS2ST1. | 0.507 |
LOC104922997 | LOC104931455 | ENSLCRP00005004887 | ENSLCRP00005010860 | Glypican-6 isoform X1. | Heparan sulfate 2-O-sulfotransferase HS2ST1. | 0.507 |
LOC104922997 | LOC104937829 | ENSLCRP00005004887 | ENSLCRP00005016613 | Glypican-6 isoform X1. | Syndecan 2. | 0.504 |
LOC104922997 | SDC3 | ENSLCRP00005004887 | ENSLCRP00005021662 | Glypican-6 isoform X1. | Syndecan 3. | 0.468 |
LOC104922997 | SDC4 | ENSLCRP00005004887 | ENSLCRP00005010455 | Glypican-6 isoform X1. | Syndecan-4 isoform X2. | 0.504 |
LOC104922997 | glce | ENSLCRP00005004887 | ENSLCRP00005019868 | Glypican-6 isoform X1. | Heparosan-N-sulfate-glucuronate 5-epimerase. | 0.420 |
LOC104922997 | hs2st1 | ENSLCRP00005004887 | ENSLCRP00005024280 | Glypican-6 isoform X1. | Heparan sulfate 2-O-sulfotransferase HS2ST1. | 0.507 |
LOC104931455 | LOC104920571 | ENSLCRP00005010860 | ENSLCRP00005024052 | Heparan sulfate 2-O-sulfotransferase HS2ST1. | Glypican 4. | 0.507 |
LOC104931455 | LOC104922697 | ENSLCRP00005010860 | ENSLCRP00005064127 | Heparan sulfate 2-O-sulfotransferase HS2ST1. | Glypican-6. | 0.507 |
page 1 of 5