STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104939292Troponin T, slow skeletal muscle isoform X1. (267 aa)    
Predicted Functional Partners:
LOC104929226
Troponin C, skeletal muscle isoform X1.
   
 0.834
LOC104929822
Myosin light chain 1, skeletal muscle isoform.
   
 0.811
LOC104918387
Troponin I, slow skeletal muscle.
 
 0.808
LOC104931962
Troponin I, slow skeletal muscle.
 
 0.806
TNNI2
Troponin I, fast skeletal muscle.
 
 0.782
TNNI2-2
Troponin I, fast skeletal muscle.
 
 0.773
LOC104940659
Troponin I, slow skeletal muscle.
 
 0.728
LOC104930620
Troponin I, fast skeletal muscle-like.
   
 0.725
LOC104940691
Troponin I, slow skeletal muscle.
 
 0.723
LOC109140259
Troponin I, slow skeletal muscle-like.
 
 0.720
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.