Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC104935001 | fam228b | ENSLCRP00005062982 | ENSLCRP00005025880 | Transcription factor IIIA. | Protein FAM228B isoform X1. | 0.485 |
coq2 | fam228b | ENSLCRP00005003417 | ENSLCRP00005025880 | 4-hydroxybenzoate polyprenyltransferase, mitochondrial. | Protein FAM228B isoform X1. | 0.400 |
fam228b | LOC104935001 | ENSLCRP00005025880 | ENSLCRP00005062982 | Protein FAM228B isoform X1. | Transcription factor IIIA. | 0.485 |
fam228b | coq2 | ENSLCRP00005025880 | ENSLCRP00005003417 | Protein FAM228B isoform X1. | 4-hydroxybenzoate polyprenyltransferase, mitochondrial. | 0.400 |
fam228b | gskip | ENSLCRP00005025880 | ENSLCRP00005045403 | Protein FAM228B isoform X1. | GSK3B-interacting protein. | 0.501 |
fam228b | man2c1 | ENSLCRP00005025880 | ENSLCRP00005028306 | Protein FAM228B isoform X1. | Alpha-mannosidase 2C1. | 0.501 |
fam228b | mindy4 | ENSLCRP00005025880 | ENSLCRP00005057724 | Protein FAM228B isoform X1. | Probable ubiquitin carboxyl-terminal hydrolase MINDY-4. | 0.538 |
gskip | fam228b | ENSLCRP00005045403 | ENSLCRP00005025880 | GSK3B-interacting protein. | Protein FAM228B isoform X1. | 0.501 |
man2c1 | fam228b | ENSLCRP00005028306 | ENSLCRP00005025880 | Alpha-mannosidase 2C1. | Protein FAM228B isoform X1. | 0.501 |
mindy4 | fam228b | ENSLCRP00005057724 | ENSLCRP00005025880 | Probable ubiquitin carboxyl-terminal hydrolase MINDY-4. | Protein FAM228B isoform X1. | 0.538 |