STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfrp5Secreted frizzled-related protein 5. (321 aa)    
Predicted Functional Partners:
wnt3a
Wingless-type MMTV integration site family, member 3.
    
 0.883
LOC104923918
Wingless-type MMTV integration site family, member 9.
    
 0.881
wnt11
Wingless-type MMTV integration site family, member 11.
    
 0.847
wnt5a
Wingless-type MMTV integration site family, member 5.
    
 0.836
wnt5b
Wingless-type MMTV integration site family, member 5.
    
 0.836
wnt4
Wingless-type MMTV integration site family, member 4.
    
 0.833
LOC104925160
Wingless-type MMTV integration site family, member 3.
    
 0.823
LOC104924241
Wingless-type MMTV integration site family, member 8.
    
 0.814
wnt8b
Wingless-type MMTV integration site family, member 8.
    
 0.814
wnt6
Wingless-type MMTV integration site family, member 6.
    
 0.813
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.