STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asz1Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 isoform X1. (479 aa)    
Predicted Functional Partners:
piwil2
Piwi-like protein 2.
   
 0.782
tdrd1
Tudor domain-containing protein 1/4/6/7.
   
 0.734
fkbp6
Inactive peptidyl-prolyl cis-trans isomerase FKBP6.
   
 0.720
tdrd9
ATP-dependent RNA helicase TDRD9 isoform X1.
    
 0.691
tdrkh
Tudor and KH domain-containing protein isoform X1.
   
 
 0.642
dbt
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
   
 0.630
henmt1
Small RNA 2'-O-methyltransferase isoform X1.
     
 0.628
piwil1
Piwi-like protein 1.
   
 0.614
LOC104918362
Putative helicase mov-10-B.1.
   
 0.612
MOV10
Putative helicase mov-10-B.1.
   
 0.612
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.