STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104920746Growth arrest-specific protein 1. (264 aa)    
Predicted Functional Partners:
ptch1
Protein patched homolog 1.
     
 0.962
ptch2
Protein patched homolog 2.
     
 0.962
ihh
Indian hedgehog protein.
    
 0.942
LOC104930803
Tiggy-winkle hedgehog protein.
    
 0.942
shh
Sonic hedgehog protein.
    
 0.942
LOC104925949
Cell adhesion molecule-related/down-regulated by oncogenes isoform X2.
     
 0.923
boc
Brother of CDO.
     
 0.923
Gas1
Growth arrest-specific protein 1.
  
  
 
0.906
ENSLCRP00005042934
Growth arrest-specific protein 1.
  
  
 
0.905
lrp2
Low-density lipoprotein receptor-related protein 2.
     
 0.904
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.