STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pipoxPeroxisomal sarcosine oxidase isoform X1. (388 aa)    
Predicted Functional Partners:
sardh
Sarcosine dehydrogenase, mitochondrial isoform X1.
  
 0.981
gldc
Glycine dehydrogenase (decarboxylating), mitochondrial.
   
 
 0.973
dmgdh
Dimethylglycine dehydrogenase, mitochondrial.
  
 0.971
LOC104926021
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 
 0.957
LOC104929186
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 
 0.957
shmt1
Serine hydroxymethyltransferase, cytosolic.
    
 0.954
SHMT2
Serine hydroxymethyltransferase, mitochondrial.
    
 0.954
shmt2
Serine hydroxymethyltransferase, mitochondrial.
    
 0.954
LOC104928235
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
  
 
 0.952
LOC104933890
Probable low-specificity L-threonine aldolase 2.
    
 0.949
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.