STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109139877Claudin-6-like. (215 aa)    
Predicted Functional Partners:
LOC104919257
Tight junction protein ZO-1 isoform X1.
   
 0.752
LOC104930515
Tight junction protein ZO-3 isoform X2.
   
 0.720
LOC104930852
Claudin-7-A.
  
0.719
LOC109141675
Claudin-4.
  
  
0.715
LOC104925790
Claudin-3.
  
  
0.715
ENSLCRP00005041876
Claudin-4.
  
  
0.715
LOC109141339
Claudin-3.
  
  
0.714
LOC104920908
Claudin-1.
   
0.714
CLDN14
Claudin-14 isoform X2.
     
0.706
LOC104923281
Claudin-8.
  
 
0.705
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.