STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109140259Troponin I, slow skeletal muscle-like. (189 aa)    
Predicted Functional Partners:
LOC104929226
Troponin C, skeletal muscle isoform X1.
   
 0.831
LOC104929822
Myosin light chain 1, skeletal muscle isoform.
   
 0.828
LOC104939292
Troponin T, slow skeletal muscle isoform X1.
 
 0.720
ENSLCRP00005057237
Troponin T, slow skeletal muscle-like isoform X1.
 
 0.711
LOC104940695
Troponin T, cardiac muscle isoforms-like.
 
 0.710
LOC104930624
Troponin T, fast skeletal muscle isoforms-like isoform X4.
 
 0.709
LOC104931946
Troponin T, cardiac muscle.
 
 
 0.650
TNNT1
Troponin T, slow skeletal muscle isoform X1.
 
 
 0.650
LOC104924476
Troponin T, fast skeletal muscle isoforms-like isoform X1.
 
 
 0.650
ENSLCRP00005046891
Troponin T2c, cardiac.
 
 
 0.650
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.