STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd5Potassium channel tetramerization domain containing 5. (263 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 
 0.752
LOC104924156
Cullin-3 isoform X1.
    
 
 0.752
cul1
Cullin-1 isoform X1.
    
 
 0.649
cacul1
CDK2-associated and cullin domain-containing protein 1.
    
 
 0.594
kctd2
BTB/POZ domain-containing protein KCTD2/5/17.
  
 
 
0.504
LOC109141333
BTB/POZ domain-containing protein KCTD21.
      
 0.468
ube2i
Ubiquitin-conjugating enzyme E2 I.
 
  
 
 0.436
LOC104936150
SUMO-conjugating enzyme UBC9-like.
 
  
 
 0.433
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.