STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
me3Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). (616 aa)    
Predicted Functional Partners:
FH
Fumarate hydratase, mitochondrial.
  
 
 0.987
pc
Pyruvate carboxylase, mitochondrial.
   
 0.981
mdh2
Malate dehydrogenase, mitochondrial.
  
 0.966
cs
Citrate synthase, mitochondrial.
  
 0.962
LOC109140894
Pyruvate kinase PKM.
  
 0.961
LOC104925043
Pyruvate kinase PKM isoform X1.
  
 0.961
LOC104935691
Malate synthase-like.
  
 
 0.960
mdh1
Malate dehydrogenase, cytoplasmic isoform X2.
  
 0.950
LOC104931836
Malate dehydrogenase, cytoplasmic.
  
 0.950
LOC104940653
L-lactate dehydrogenase C chain isoform X2.
  
 0.942
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.