STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104919517DENN domain-containing protein 2C isoform X1. (925 aa)    
Predicted Functional Partners:
rab35
Ras-related protein Rab-35.
    
 0.702
LOC104923366
Ras-related protein Rab-35-like.
    
 0.693
ift27
Intraflagellar transport protein 27 homolog isoform X2.
    
 0.693
suox
Sulfite oxidase, mitochondrial.
      
 0.599
ENSLCRP00005033429
Ras-related protein Rab-9B.
     
 0.567
rab15
Ras-related protein Rab-15 isoform X1.
     
 0.550
LOC104921844
DENN domain-containing protein 1B isoform X1.
    
 
0.519
LOC104936337
Rab proteins geranylgeranyltransferase component A 1.
   
 
  0.469
itsn2
Intersectin 2.
    
 
 0.402
LOC104920145
Intersectin-2.
    
 
 0.402
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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