STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tstd3Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3. (174 aa)    
Predicted Functional Partners:
sod2
Superoxide dismutase [Mn], mitochondrial.
  
 
 0.868
dap3
Death associated protein 3.
   
   0.772
ybey
Endoribonuclease YbeY.
   
   0.767
mrpl21
39S ribosomal protein L21, mitochondrial.
  
 
 0.753
rps11
Small subunit ribosomal protein S11e.
   
   0.749
mrpl17
39S ribosomal protein L17, mitochondrial.
  
   0.744
mrpl3
39S ribosomal protein L3, mitochondrial.
   
   0.742
nfs1
Cysteine desulfurase, mitochondrial.
   
 0.738
scly
Selenocysteine lyase isoform X1.
   
 0.738
mrpl13
39S ribosomal protein L13, mitochondrial.
  
   0.734
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.