STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrp2Neuropilin 2. (923 aa)    
Predicted Functional Partners:
LOC104926701
Solute carrier family 40 member 1.
    
 0.536
slc40a1
Solute carrier family 40 (iron-regulated transporter), member 1.
    
 0.536
pex12
Peroxisome assembly protein 12.
    
 
 0.530
pros1
Vitamin K-dependent protein S.
   
 0.521
aasdh
Beta-alanine-activating enzyme isoform X1.
     
 0.519
pex10
Peroxisome biogenesis factor 10.
    
 
 0.509
atp7a
Copper-transporting ATPase 1.
  
 
 0.506
LOC104939466
Copper-transporting ATPase 2.
  
 
 0.506
ENSLCRP00005057046
annotation not available
  
 
 0.506
mcfd2
Multiple coagulation factor deficiency protein 2.
     
 0.451
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.