STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104933455Novel protein kinase C delta type. (701 aa)    
Predicted Functional Partners:
card9
Caspase recruitment domain-containing protein 9 isoform X2.
   
 
 0.960
LOC104929510
Mitogen-activated protein kinase 1/3.
    
0.924
mapk1
Mitogen-activated protein kinase 1/3.
    
0.924
braf
B-Raf proto-oncogene serine/threonine-protein kinase.
    
0.912
LOC104930864
A-Raf proto-oncogene serine/threonine-protein kinase.
    
0.912
PLCB4
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1.
     
 0.907
PLCB1
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1.
     
 0.907
plcb3
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X1.
     
 0.907
LOC104935685
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like.
     
 0.907
LOC104926477
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
 
0.906
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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