STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mapre1Microtubule-associated protein RP/EB family member 1 isoform X1. (262 aa)    
Predicted Functional Partners:
LOC104925200
Dynactin subunit 1 isoform X1.
   
 
 0.909
LOC104932475
Dynactin subunit 1 isoform X1.
   
 
 0.909
mad2l1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.859
ckap5
Cytoskeleton-associated protein 5 isoform X1.
   
 
 0.837
bub3
Mitotic checkpoint protein BUB3.
   
 0.805
bub1b
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.783
mapre2
Microtubule-associated protein RP/EB family member 2 isoform X2.
  
 
  
0.750
LOC104929993
Microtubule-associated protein RP/EB family member 3.
  
 
  
0.750
LOC104928693
Aurora kinase B.
   
 0.744
aurka
Aurora kinase A.
   
 0.744
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.