STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104933014Tubulin monoglycylase TTLL3 isoform X1. (810 aa)    
Predicted Functional Partners:
LOC104920096
Coiled-coil domain-containing protein 74A isoform X2.
      
 0.668
lrrc58
Leucine-rich repeat-containing protein 58.
    
 0.628
dcp2
M7GpppN-mRNA hydrolase isoform X3.
    
 
 0.597
ttll12
Tubulin--tyrosine ligase-like protein 12.
      
0.568
ttll5
Tubulin polyglutamylase TTLL5 isoform X4.
      
0.502
dcp1a
MRNA-decapping enzyme 1A.
    
 
 0.493
ENSLCRP00005058371
annotation not available
    
 
 0.493
dcp1b
MRNA-decapping enzyme 1B.
    
 
 0.493
nicn1
Nicolin-1.
   
 0.422
edc3
Enhancer of mRNA-decapping protein 3.
    
 
 0.419
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.