STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005031473annotation not available (84 aa)    
Predicted Functional Partners:
mysm1
Histone H2A deubiquitinase MYSM1.
   
 0.980
ubxn7
UBX domain-containing protein 7.
    
 0.977
LOC104919927
Ubiquitin-conjugating enzyme E2 variant 1-like isoform X2.
   
 0.958
trip12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 0.929
traf7
E3 ubiquitin-protein ligase TRAF7 isoform X2.
    
 0.879
LOC109141895
Next to BRCA1 gene 1 protein isoform X1.
   
 0.859
LOC104928988
Next to BRCA1 gene 1 protein-like isoform X1.
   
 0.859
birc6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 0.851
rps25
Small subunit ribosomal protein S25e.
   
 0.845
rps24
40S ribosomal protein S24 isoform X2.
   
 0.843
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.