STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syncripHeterogeneous nuclear ribonucleoprotein Q isoform X1. (630 aa)    
Predicted Functional Partners:
fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
   0.714
hnrnpk
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.663
LOC104922479
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein K.
   
 0.663
LOC104920240
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 0.619
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3 isoform X1.
   
 0.614
hnrnph1
Heterogeneous nuclear ribonucleoprotein F/H.
   
 0.614
SRSF3
Serine/arginine-rich splicing factor 3 isoform X1.
   
 0.590
ENSLCRP00005065297
Splicing factor, arginine/serine-rich 3.
   
 0.590
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U-like protein 1.
   
 0.585
hnrnpu
Heterogeneous nuclear ribonucleoprotein U.
   
 0.585
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.