STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104918594C-mer proto-oncogene tyrosine kinase. (939 aa)    
Predicted Functional Partners:
pros1
Vitamin K-dependent protein S.
     
 0.812
gas6
Growth arrest-specific protein 6.
    
 0.728
grb2
Growth factor receptor-bound protein 2 isoform X1.
   
 0.555
LOC104919927
Ubiquitin-conjugating enzyme E2 variant 1-like isoform X2.
   
 0.528
mib2
E3 ubiquitin-protein ligase MIB2 isoform X1.
   
 0.526
LOC104934685
Transmembrane protein 119.
      
 0.512
LOC104927652
P2Y purinoceptor 12.
     
 0.496
LOC104938335
Complement C1q subcomponent subunit C.
   
 0.484
birc6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 0.474
ENSLCRP00005029456
annotation not available
   
 0.469
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.