STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
id2DNA-binding protein inhibitor ID-2. (136 aa)    
Predicted Functional Partners:
LOC104929652
Transcription factor E2-alpha-like.
    
 
 0.645
TCF4
Transcription factor 4 isoform X1.
    
 
 0.645
tcf12
Transcription factor 12.
    
 
 0.645
LOC109140959
Transcription factor E2-alpha isoform X1.
    
 
 0.645
LOC104931421
Transcription factor 4/12.
    
 
 0.645
LOC104936906
Nanos homolog 2.
      
 0.585
sp7
Transcription factor Sp7 isoform X1.
    
 
 0.569
ascl1
Achaete-scute complex protein.
    
 0.565
LOC109138367
Achaete-scute complex protein.
    
 0.565
LOC104936228
Endothelial PAS domain-containing protein 1 isoform X1.
      
 0.520
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.