STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fzd9Frizzled 9/10. (583 aa)    
Predicted Functional Partners:
wnt11
Wingless-type MMTV integration site family, member 11.
   
 0.971
rnf43
E3 ubiquitin-protein ligase RNF43.
    
 0.950
znrf3
E3 ubiquitin-protein ligase ZNRF3 isoform X2.
    
 0.939
ryk
Tyrosine-protein kinase RYK isoform X1.
    
 0.924
bambi
BMP and activin membrane-bound inhibitor homolog.
    
 0.915
LOC104920571
Glypican 4.
     
 0.906
wnt5a
Wingless-type MMTV integration site family, member 5.
    
 0.890
wnt5b
Wingless-type MMTV integration site family, member 5.
    
 0.890
LOC104939163
Low density lipoprotein receptor-related protein 5/6.
    
 0.879
lrp6
Low density lipoprotein receptor-related protein 5/6.
    
 0.879
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.