STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104924681Acidic mammalian chitinase. (498 aa)    
Predicted Functional Partners:
hexb
Beta-hexosaminidase subunit beta isoform X2.
    
 0.943
LOC104924344
Beta-hexosaminidase subunit alpha isoform X1.
    
 0.943
renbp
N-acylglucosamine 2-epimerase.
     
  0.900
COX3
Cytochrome c oxidase subunit III.
    
 0.729
COX2
Cytochrome c oxidase subunit II.
    
 0.726
LOC113744477
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.678
LOC104925490
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.624
LOC104937893
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.624
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.558
LOC104940605
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.558
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.