STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo7F-box only protein 7 isoform X1. (476 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1.
    
 0.964
cul1
Cullin-1 isoform X1.
   
 0.959
psmf1
Proteasome inhibitor subunit 1 (PI31).
   
 0.946
rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.806
CUL3
Cullin 3.
   
 0.777
LOC104924156
Cullin-3 isoform X1.
   
 0.777
pink1
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 
 0.736
rnf7
RING-box protein 2.
    
 0.695
psmb4
Proteasome subunit beta type-4.
    
 0.660
psmb1
Proteasome subunit beta type-1.
   
 0.603
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.