STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104920427Coagulation factor XI. (379 aa)    
Predicted Functional Partners:
met
Hepatocyte growth factor receptor isoform X1.
    
 0.586
LOC104920504
Macrophage-stimulating protein receptor isoform X1.
    
 0.586
mst1r
Macrophage-stimulating protein receptor.
    
 0.586
LOC104935247
Tryptase-2 isoform X2.
 
      0.580
Tmprss5
Transmembrane protease serine 5.
 
      0.511
ENSLCRP00005029456
annotation not available
    
  0.506
LOC104939493
Chymotrypsin A.
 
 
 0.472
LOC104938940
Chymotrypsin B.
 
 
 0.469
LOC104923350
Serine protease 27.
 
      0.444
ENSLCRP00005063393
Suppressor of tumorigenicity 14 protein homolog isoform X1.
 
      0.442
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.