STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdrd5Tudor domain-containing protein 5. (801 aa)    
Predicted Functional Partners:
tdrd9
ATP-dependent RNA helicase TDRD9 isoform X1.
   
 0.849
piwil2
Piwi-like protein 2.
   
 0.827
piwil1
Piwi-like protein 1.
   
 0.769
tdrd12
Tudor domain containing 12.
   
 0.639
exd1
Exonuclease 3'-5' domain-containing protein 1.
   
  
 0.604
fkbp6
Inactive peptidyl-prolyl cis-trans isomerase FKBP6.
   
 
 0.601
vps53
Vacuolar protein sorting-associated protein 53 homolog.
      
 0.598
MARF1
Meiosis regulator and mRNA stability factor 1 isoform X1.
      
 0.596
asz1
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 isoform X1.
    
 0.576
parn
Poly(A)-specific ribonuclease PARN isoform X2.
      
 0.575
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.