STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr2c2apNuclear receptor 2C2-associated protein. (142 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide-dependent protein kinase 1 isoform X2.
    
 0.670
slc35e1
Solute carrier family 35 member E1 isoform X2.
      
 0.577
SUGP1
SURP and G-patch domain-containing protein 1 isoform X1.
      
 0.574
cherp
Calcium homeostasis endoplasmic reticulum protein isoform X2.
      
 0.571
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 0.526
LOC104919927
Ubiquitin-conjugating enzyme E2 variant 1-like isoform X2.
     
 0.480
ENSLCRP00005029456
annotation not available
   
 
 0.472
ddx49
DEAD-box helicase 49.
    
 
 0.454
LOC104925556
Zinc finger and BTB domain-containing protein 3 isoform X1.
    
 0.432
sgpp1
Sphingosine-1-phosphate phosphatase 1 isoform X1.
      
 0.408
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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