STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2ql1Ubiquitin-conjugating enzyme E2Q-like protein 1. (284 aa)    
Predicted Functional Partners:
LOC104919927
Ubiquitin-conjugating enzyme E2 variant 1-like isoform X2.
     
 0.945
LOC104940600
Ubiquitin-conjugating enzyme E2 Q2 isoform X1.
  
  
0.910
ENSLCRP00005041797
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast).
     
 0.669
ube2j1
Ubiquitin-conjugating enzyme E2 J1.
     
 0.638
ube2w
Ubiquitin-conjugating enzyme E2 W.
     
 0.619
atg7
Ubiquitin-like modifier-activating enzyme ATG7.
    
 0.609
uba5
Ubiquitin-like modifier-activating enzyme 5.
    
 0.609
ube2s
Ubiquitin-conjugating enzyme E2 S.
   
 
 0.608
ube2j2
Ubiquitin-conjugating enzyme E2 J2 isoform X1.
     
 0.593
c1qtnf12
C1q and TNF related 12.
     
 0.593
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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