Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLCRP00005054574 | LOC104921833 | ENSLCRP00005054574 | ENSLCRP00005036257 | annotation not available | PDZ and LIM domain protein 1/2/3/4. | 0.520 |
LOC104921833 | ENSLCRP00005054574 | ENSLCRP00005036257 | ENSLCRP00005054574 | PDZ and LIM domain protein 1/2/3/4. | annotation not available | 0.520 |
LOC104921833 | LOC104921857 | ENSLCRP00005036257 | ENSLCRP00005036258 | PDZ and LIM domain protein 1/2/3/4. | Sorbin and SH3 domain-containing protein 2 isoform X1. | 0.644 |
LOC104921833 | LOC104939608 | ENSLCRP00005036257 | ENSLCRP00005043421 | PDZ and LIM domain protein 1/2/3/4. | Vinculin isoform X7. | 0.536 |
LOC104921833 | ctnna1 | ENSLCRP00005036257 | ENSLCRP00005057576 | PDZ and LIM domain protein 1/2/3/4. | Catenin alpha-1. | 0.536 |
LOC104921833 | ctnna2 | ENSLCRP00005036257 | ENSLCRP00005025263 | PDZ and LIM domain protein 1/2/3/4. | Catenin alpha 2. | 0.536 |
LOC104921833 | ctnnal1 | ENSLCRP00005036257 | ENSLCRP00005008240 | PDZ and LIM domain protein 1/2/3/4. | Alpha-catulin. | 0.536 |
LOC104921833 | parva | ENSLCRP00005036257 | ENSLCRP00005054434 | PDZ and LIM domain protein 1/2/3/4. | Parvin alpha. | 0.520 |
LOC104921833 | parvb | ENSLCRP00005036257 | ENSLCRP00005031477 | PDZ and LIM domain protein 1/2/3/4. | Beta-parvin isoform X1. | 0.520 |
LOC104921833 | parvg | ENSLCRP00005036257 | ENSLCRP00005031495 | PDZ and LIM domain protein 1/2/3/4. | Gamma-parvin isoform X1. | 0.520 |
LOC104921833 | vcl | ENSLCRP00005036257 | ENSLCRP00005056311 | PDZ and LIM domain protein 1/2/3/4. | Vinculin. | 0.536 |
LOC104921857 | LOC104921833 | ENSLCRP00005036258 | ENSLCRP00005036257 | Sorbin and SH3 domain-containing protein 2 isoform X1. | PDZ and LIM domain protein 1/2/3/4. | 0.644 |
LOC104921857 | LOC104939608 | ENSLCRP00005036258 | ENSLCRP00005043421 | Sorbin and SH3 domain-containing protein 2 isoform X1. | Vinculin isoform X7. | 0.794 |
LOC104921857 | ctnna1 | ENSLCRP00005036258 | ENSLCRP00005057576 | Sorbin and SH3 domain-containing protein 2 isoform X1. | Catenin alpha-1. | 0.498 |
LOC104921857 | ctnna2 | ENSLCRP00005036258 | ENSLCRP00005025263 | Sorbin and SH3 domain-containing protein 2 isoform X1. | Catenin alpha 2. | 0.498 |
LOC104921857 | ctnnal1 | ENSLCRP00005036258 | ENSLCRP00005008240 | Sorbin and SH3 domain-containing protein 2 isoform X1. | Alpha-catulin. | 0.498 |
LOC104921857 | vcl | ENSLCRP00005036258 | ENSLCRP00005056311 | Sorbin and SH3 domain-containing protein 2 isoform X1. | Vinculin. | 0.794 |
LOC104939608 | LOC104921833 | ENSLCRP00005043421 | ENSLCRP00005036257 | Vinculin isoform X7. | PDZ and LIM domain protein 1/2/3/4. | 0.536 |
LOC104939608 | LOC104921857 | ENSLCRP00005043421 | ENSLCRP00005036258 | Vinculin isoform X7. | Sorbin and SH3 domain-containing protein 2 isoform X1. | 0.794 |
LOC104939608 | ctnna1 | ENSLCRP00005043421 | ENSLCRP00005057576 | Vinculin isoform X7. | Catenin alpha-1. | 0.975 |
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