STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104926564MARVEL domain-containing protein 2 isoform X2. (596 aa)    
Predicted Functional Partners:
LOC104919257
Tight junction protein ZO-1 isoform X1.
   
 0.939
LOC104921000
MARVEL domain-containing protein 2.
  
  
 
0.907
marveld2
MARVEL domain-containing protein 2.
  
  
 
0.902
cdk9
Cyclin-dependent kinase 9.
    
 0.705
eaf1
ELL-associated factor 1.
    
 0.653
eaf2
ELL-associated factor 2.
    
 0.653
LOC104937214
Tubulin alpha-1B chain isoform X3.
     
  0.650
LOC109138324
Tubulin alpha chain.
     
  0.650
elmod2
Tubulin alpha-1C chain.
     
  0.650
LOC104929096
Tubulin alpha chain.
     
  0.650
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.