STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104934824Potassium inwardly-rectifying channel subfamily J member 8. (421 aa)    
Predicted Functional Partners:
abcc9
ATP-binding cassette sub-family C member 9 isoform X1.
 
 
 0.954
abcc8
ATP-binding cassette sub-family C member 8 isoform X1.
 
 
 0.928
LOC104919939
Rap guanine nucleotide exchange factor 3 isoform X1.
     
 0.613
rapgef4
Rap guanine nucleotide exchange factor 4.
     
 0.578
LOC104932605
Rap guanine nucleotide exchange factor 4 isoform X2.
     
 0.578
cd59
CD59 glycoprotein precursor.
      
 0.452
abcc5
ATP-binding cassette, subfamily C (CFTR/MRP), member 5.
   
 0.428
ENSLCRP00005019086
annotation not available
   
 0.428
LOC104925362
ATP-binding cassette, subfamily C (CFTR/MRP), member 5.
   
 0.428
abcc12
ATP-binding cassette, subfamily C (CFTR/MRP), member 12.
   
 0.428
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.