STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
surf2Surfeit locus protein 2. (248 aa)    
Predicted Functional Partners:
surf6
Surfeit locus protein 6.
      
 0.594
prepl
Prolyl endopeptidase-like.
      
 0.582
ENSLCRP00005011395
annotation not available
      
 0.566
LOC104925130
ER-derived vesicles protein.
      
 0.566
LOC104939083
Surfeit locus 1 family protein.
      
 0.519
SURF1
SURF1 cytochrome c oxidase assembly factor.
      
 0.519
nexn
Nexilin isoform X1.
      
 0.452
alg12
Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase.
      
 0.430
LOC104930648
Mediator of RNA polymerase II transcription subunit 22 isoform X2.
   
  
 0.422
ENSLCRP00005034716
annotation not available
   
  
 0.422
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.