STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113744825Histone-lysine N-methyltransferase 2C-like. (468 aa)    
Predicted Functional Partners:
ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.930
rbbp5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.928
LOC104938105
Histone-lysine N-methyltransferase 2C-like isoform X1.
 
      0.900
wdr5
WD repeat-containing protein 5.
   
 0.820
wsb1
WD repeat and SOCS box containing 1.
   
 0.735
wsb2
WD repeat and SOCS box-containing protein 2.
   
 0.735
ncoa6
Nuclear receptor coactivator 6.
   
 0.711
cenpn
Centromere protein N.
   
 0.652
kdm6a
Lysine-specific demethylase 6A isoform X1.
   
 0.644
LOC104937847
Lysine-specific demethylase 6A isoform X1.
   
 0.644
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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