STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrgukLeucine-rich repeat and guanylate kinase domain-containing protein isoform X1. (787 aa)    
Predicted Functional Partners:
dpy30
Protein dpy-30 homolog.
   
 
 0.847
ENSLCRP00005006710
annotation not available
   
 0.817
LOC104924395
C-Myc-binding protein.
    
 
 0.808
LOC104924721
c-Myc-binding protein.
    
 
 0.808
ENSLCRP00005027337
annotation not available
   
 
 0.807
Ak9
Adenylate/nucleoside-diphosphate kinase.
   
 0.803
cfap74
Cilia and flagella associated protein 74.
    
 
 0.800
LOC104926887
Serine/threonine-protein phosphatase alpha-2 isoform.
   
 0.789
PPP1CB
Serine/threonine-protein phosphatase PP1-beta catalytic subunit-like.
   
 0.789
LOC104936456
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
   
 0.789
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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