STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113747013Deoxyribonuclease-1-like. (157 aa)    
Predicted Functional Partners:
LOC109136711
Ras-related GTP-binding protein A/B.
   
 0.523
LOC104938599
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.498
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.498
lamtor2
Ragulator complex protein LAMTOR2.
    
 0.482
LOC104927697
Phospholipase A2, minor isoenzyme.
   
    0.440
lamtor1
Ragulator complex protein LAMTOR1.
    
 0.428
lamtor5
Ragulator complex protein LAMTOR5.
    
 0.426
ikbkb
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
 0.425
ikbke
Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.
    
 0.425
LOC104928982
Inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1.
    
 0.425
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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