STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRAThyroid hormone receptor alpha isoform X1. (435 aa)    
Predicted Functional Partners:
thrb
Thyroid hormone receptor beta isoform X3.
  
  
 
0.901
LOC104929205
Thyroid hormone receptor alpha-B isoform X1.
  
  
 
0.901
ncor2
Nuclear receptor corepressor 2 isoform X1.
    
 0.760
med1
Mediator of RNA polymerase II transcription subunit 1.
    
 0.697
trh
Thyrotropin releasing hormone.
      
 0.583
LOC104922748
Retinoic acid receptor RXR-beta-A-like isoform X1.
    
0.578
rxra
Retinoic acid receptor RXR-alpha isoform X1.
    
0.578
RXRB
Retinoic acid receptor RXR-beta-A isoform X1.
    
0.578
LOC104918458
Retinoic acid receptor RXR-gamma-B isoform X4.
    
0.578
ENSLCRP00005019192
annotation not available
    
 0.525
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.