STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104935506Transmembrane protein 17B. (184 aa)    
Predicted Functional Partners:
ENSLCRP00005000523
Transmembrane protein 216.
   
  
 0.599
b9d1
B9 domain-containing protein 1.
    
 
 0.597
tmem231
Transmembrane protein 231.
    
 
 0.595
tctn1
Tectonic-1 isoform X3.
      
 0.576
nphp1
Nephrocystin-1.
      
 0.547
tmem67
Meckelin isoform X4.
      
 0.537
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 
 0.533
ttll10
Inactive polyglycylase TTLL10 isoform X1.
      
 0.504
NPHP4
Nephrocystin-4 isoform X1.
      
 0.495
b9d2
B9 domain-containing protein 2.
    
 
 0.490
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.