STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005041249annotation not available (470 aa)    
Predicted Functional Partners:
LOC104918663
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 0.994
nup93
Nuclear pore complex protein Nup93.
   
 0.920
nup133
Nucleoporin 133.
   
 0.915
nup155
Nuclear pore complex protein Nup155.
   
 0.915
nup205
Nuclear pore complex protein Nup205.
   
 0.915
nup107
Nuclear pore complex protein Nup107.
   
 0.913
nup214
Nuclear pore complex protein Nup214 isoform X1.
   
 0.912
NUP54
Nucleoporin 54.
   
 0.912
nup85
Nuclear pore complex protein Nup85 isoform X2.
   
 0.912
rae1
MRNA export factor isoform X1.
   
 0.911
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.