STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc22Palmitoyltransferase ZDHHC22. (277 aa)    
Predicted Functional Partners:
LOC104923925
Protein FAM163B.
   
  
 0.656
zdhhc4
Zinc finger DHHC-type containing 4.
      
 0.584
zdhhc23
Palmitoyltransferase ZDHHC23.
      
 0.576
zc2hc1a
Zinc finger C2HC domain-containing protein 1A isoform X1.
      
 0.571
znf106
Zinc finger protein 106.
    
 0.541
zdhhc6
Palmitoyltransferase ZDHHC6 isoform X1.
   
 
 0.516
zdhhc2
Palmitoyltransferase ZDHHC2/15/20.
     
0.504
zdhhc1
Probable palmitoyltransferase ZDHHC1.
      
 0.499
pot1
Protection of telomeres protein 1.
    
 0.486
lrrtm2
Leucine-rich repeat transmembrane neuronal protein 1/2.
   
  
 0.477
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.