STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113747122Kinetochore protein Spc24-like. (283 aa)    
Predicted Functional Partners:
spc25
Kinetochore protein Spc25, animal type.
   
 0.975
ndc80
Kinetochore protein NDC80 homolog isoform X1.
   
 0.967
nuf2
Kinetochore protein Nuf2.
   
 0.960
mis12
Kinetochore-associated protein MIS12.
   
 0.910
LOC104918573
Uncharacterized protein LOC104918573 isoform X1.
   
 0.897
LOC104922636
Polyamine-modulated factor 1.
   
 0.880
nsl1
NSL1 component of MIS12 kinetochore complex.
   
 0.856
knl1
Kinetochore scaffold 1.
   
 0.846
cdc20
Cell division cycle 20, cofactor of APC complex.
   
 
 0.822
LOC104936296
Uncharacterized protein LOC104936296.
   
 
 0.813
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.