STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005042848annotation not available (129 aa)    
Predicted Functional Partners:
osgep
O-sialoglycoprotein endopeptidase.
   
 0.996
osgepl1
O-sialoglycoprotein endopeptidase like 1.
   
 0.979
tp53rk
TP53 regulating kinase and related kinases.
   
 0.952
tprkb
EKC/KEOPS complex subunit CGI121/TPRKB.
    
 0.950
tmem187
Transmembrane protein 187.
      
 0.607
yrdc
YrdC domain-containing protein, mitochondrial isoform X1.
      
 0.570
LOC109140010
Uncharacterized protein LOC109140010.
      
 0.570
nup43
Nuclear pore complex protein Nup43.
    
   0.562
ddx46
Probable ATP-dependent RNA helicase DDX46 isoform X2.
    
 
 0.489
wdr73
WD repeat-containing protein 73 isoform X1.
      
 0.408
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.