STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNS3-2Tensin-3. (1390 aa)    
Predicted Functional Partners:
met
Hepatocyte growth factor receptor isoform X1.
   
 0.953
LOC104920504
Macrophage-stimulating protein receptor isoform X1.
   
 0.953
mst1r
Macrophage-stimulating protein receptor.
   
 0.953
itgb6
Integrin beta 6.
   
 0.709
gak
Cyclin-G-associated kinase isoform X1.
   
0.690
itgb8
Integrin beta 8.
   
 0.688
LOC104938242
Integrin beta 2.
   
 0.680
ITGB1
Integrin beta 1.
   
 0.680
itgb1
Integrin beta-1 isoform X1.
   
 0.680
ENSLCRP00005065683
annotation not available
   
 0.680
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.