STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec61gProtein transport protein SEC61 subunit gamma and related proteins. (66 aa)    
Predicted Functional Partners:
sec61b
Protein transport protein SEC61 subunit beta.
   
 0.999
sec63
Translocation protein SEC63 homolog.
    
 
 0.998
fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
  0.996
LOC104930493
Protein transport protein Sec61 subunit alpha-like 1.
   
 0.993
sec62
SEC62 homolog, preprotein translocation factor.
    
 
 0.993
rpn1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1.
   
 0.990
ddost
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit.
   
 0.990
rpn2
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X2.
    
 0.987
LOC104938919
Protein transport protein Sec61 subunit alpha-like 1.
   
 0.940
rpl31
Large subunit ribosomal protein L31e.
  
   0.916
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.