STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlgn1Neuroligin-1 isoform X1. (884 aa)    
Predicted Functional Partners:
LOC104926071
Neurexin-3a isoform X1.
   
 0.966
LOC104923885
Neurexin-1a isoform X1.
   
 0.966
nrxn1
Neurexin 1.
   
 0.680
LOC104929499
Neurexin-3b isoform X6.
   
 0.678
LOC104925370
Neurexin-1-like isoform X6.
   
 0.677
nrxn2
Neurexin-2-beta isoform X1.
   
 0.677
LOC104938060
Disks large homolog 4 isoform X2.
    
 0.558
LOC104936939
Disks large homolog 4 isoform X2.
    
 0.558
LOC104934728
MAM domain-containing glycosylphosphatidylinositol anchor protein 2.
   
 0.557
mdga1
MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X1.
   
 0.557
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.