STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpraReceptor-type tyrosine-protein phosphatase alpha. (839 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2 isoform X1.
   
 0.959
ENSLCRP00005046309
Receptor-type tyrosine-protein phosphatase S.
 
 
   0.827
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.644
pts
6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase.
    
 
 0.612
pex11a
Peroxisomal biogenesis factor 11 alpha.
      
 0.611
wbp2
WW domain-binding protein 2 isoform X1.
   
 
 0.605
ubox5
RING finger protein 37 isoform X1.
      
 0.602
znf366
Zinc finger protein 366.
     
 0.589
znf367
Zinc finger protein 367 isoform X1.
     
 0.584
thnsl2
O-phospho-L-threonine phospho-lyase.
      
 0.582
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.